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Intron Name: Anas_platyrhynchos_platyrhynchos_21_5756734_5757468_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5756734 - 5757468

Intron Length:

735

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATC|GTAAGTCCT

5'SS Class:

major

3'SS Sequence:

TTGTACTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

CTTTCTTGTACT

Flanking Amino Acid:

LQQQLKELTNPDDNIPAKIL

Intron Amino Acid Position:

573

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.3

42.9

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

83.1

0.74

0.9

77.3

36.6

Minor 5ss

38.4

-1.3

52.4

38.3

Minor BPS

60.7

0.42

1.8

80.58

41.3

Associated Gene:

Gene:

TOP1

Ensembl Gene ID:

ENSAPLG00000008429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008851

5735554 - 5759185

23632