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Intron Name: Anas_platyrhynchos_platyrhynchos_21_5757597_5758642_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5757597 - 5758642

Intron Length:

1046

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTCTGA

5'SS Class:

major

3'SS Sequence:

TTGCCTCTCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

TTGTTCACAGTG

Flanking Amino Acid:

EKSMMNLQSKIDAKKEQLAD

Intron Amino Acid Position:

616

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.1

58.9

42.7

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

73.1

0.52

0.8

65.9

35.9

Minor 5ss

42.2

-0.9

3.1

56.9

47.2

Minor BPS

43.5

-0.6

52.03

Associated Gene:

Gene:

TOP1

Ensembl Gene ID:

ENSAPLG00000008429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008851

5735554 - 5759185

23632