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Intron Name: Anas_platyrhynchos_platyrhynchos_21_5758738_5759025_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5758738 - 5759025

Intron Length:

288

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGGCTG

5'SS Class:

major

3'SS Sequence:

GCCCAGGACCAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAGCCAC

U12 Branch Point Sequence:

CTGCCCAGGACC

Flanking Amino Acid:

AKVRRDEKSKNKVMDQACNI

Intron Amino Acid Position:

647

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

67.1

Major BPS

47.8

-0.1

1.3

56.1

40.7

Major PPT

45.2

-0.2

1.1

32.6

34.3

Minor 5ss

36.1

-1.6

3.5

47.8

42.2

Minor BPS

46.7

-0.2

1.8

57.18

41.4

Associated Gene:

Gene:

TOP1

Ensembl Gene ID:

ENSAPLG00000008429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008851

5735554 - 5759185

23632