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Intron Name: Anas_platyrhynchos_platyrhynchos_21_579199_584105_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

579199 - 584105

Intron Length:

4907

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGAGTT

5'SS Class:

strong_major

3'SS Sequence:

GCTTGTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

TCCCTCTTATGC

Flanking Amino Acid:

HCYGDGSGSKKNQLLHWQAV

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

81.8

29.7

Major BPS

79.1

0.72

69.3

38.4

Major PPT

76.5

0.6

72.6

42.4

Minor 5ss

38.1

-1.3

3.6

56.6

Minor BPS

46.9

-0.2

1.9

54.51

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015778

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016441

579081 - 611507

32427