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Intron Name: Anas_platyrhynchos_platyrhynchos_21_5803701_5804058_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5803701 - 5804058

Intron Length:

358

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCCGCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAC

U12 Branch Point Sequence:

TTTCCCCGCACA

Flanking Amino Acid:

GVLDVPSCQIAIRPEGKNNR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

69.7

35.1

Major BPS

71.3

0.53

1.2

63.1

44.5

Major PPT

0.54

0.9

68.7

31.7

Minor 5ss

-2.4

3.1

36.8

40.4

Minor BPS

48.1

-0.1

2.2

70.97

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006836

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007250

5803025 - 5809804

6780