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Intron Name: Anas_platyrhynchos_platyrhynchos_21_5804791_5805323_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5804791 - 5805323

Intron Length:

533

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTGAGCATC

5'SS Class:

major

3'SS Sequence:

TGCCTCCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTCAC

U12 Branch Point Sequence:

CCTGGCTCACTC

Flanking Amino Acid:

YCRPVPFDEEKIGTERACYR

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.6

0.42

1.1

40.1

Major BPS

54.8

0.12

1.2

58.7

38.1

Major PPT

71.1

0.47

0.8

61.9

34.9

Minor 5ss

39.8

-1.1

48.6

41.6

Minor BPS

39.6

-0.8

2.1

45.19

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006836

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007250

5803025 - 5809804

6780