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Intron Name: Anas_platyrhynchos_platyrhynchos_21_5808007_5808177_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5808007 - 5808177

Intron Length:

171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTTGCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

GTTTTTTTGACT

Flanking Amino Acid:

DNAKQKTEIVADNGLNPLWS

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.76

72.2

39.5

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

79.1

0.66

0.9

72.8

42.2

Minor 5ss

30.4

-2.2

3.2

31.9

42.5

Minor BPS

76.2

0.91

1.1

87.13

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006836

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007250

5803025 - 5809804

6780