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Intron Name: Anas_platyrhynchos_platyrhynchos_21_5808547_5809075_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5808547 - 5809075

Intron Length:

529

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTGGG

5'SS Class:

major

3'SS Sequence:

GCTCCCATCCAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCTTCAC

U12 Branch Point Sequence:

CAGCCCTTCACG

Flanking Amino Acid:

LVKIDIFPSKQENGEINLFS

Intron Amino Acid Position:

427

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

1.1

67.1

44.6

Major BPS

65.1

0.38

1.1

68.9

36.5

Major PPT

56.7

0.15

52.9

35.6

Minor 5ss

37.6

-1.4

3.2

49.7

46.6

Minor BPS

50.6

-0.1

1.9

53.81

46.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006836

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007250

5803025 - 5809804

6780