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Intron Name: Anas_platyrhynchos_platyrhynchos_21_5809264_5809761_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5809264 - 5809761

Intron Length:

498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGACGG

5'SS Class:

major

3'SS Sequence:

GTGCCCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

ATCCTCCCAGCG

Flanking Amino Acid:

LADHFESRERRVLRRTRVNG

Intron Amino Acid Position:

489

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

57.3

47.4

Major BPS

87.6

0.93

0.9

89.3

Major PPT

70.4

0.46

0.9

62.5

34.6

Minor 5ss

-2.3

3.3

38.8

46.3

Minor BPS

39.8

-0.9

1.9

44.09

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006836

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007250

5803025 - 5809804

6780