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Intron Name: Anas_platyrhynchos_platyrhynchos_21_5816170_5817584_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5816170 - 5817584

Intron Length:

1415

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGGGGC

5'SS Class:

major

3'SS Sequence:

TTTCTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAC

U12 Branch Point Sequence:

GCATCTCTGACA

Flanking Amino Acid:

APVQPPATQLETD*

Intron Amino Acid Position:

925

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

64.8

41.3

Major BPS

69.1

0.47

60.7

37.6

Major PPT

94.6

0.6

88.2

29.1

Minor 5ss

30.1

-2.3

3.5

41.6

45.3

Minor BPS

51.8

0.05

1.7

60.47

39.4

Associated Gene:

Gene:

ZHX3

Ensembl Gene ID:

ENSAPLG00000021225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042504

5815537 - 5856890

41354