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Intron Name: Anas_platyrhynchos_platyrhynchos_21_5840277_5856387_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

5840277 - 5856387

Intron Length:

16111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

TGCTCTCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTAAT

U12 Branch Point Sequence:

GCAGCAGTAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.8

35.2

Major BPS

64.3

0.36

1.2

65.3

38.6

Major PPT

81.7

0.71

0.8

37.3

Minor 5ss

28.4

-2.5

2.8

34.6

41.3

Minor BPS

43.5

-0.4

2.2

58.32

44.8

Associated Gene:

Gene:

ZHX3

Ensembl Gene ID:

ENSAPLG00000021225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042504

5815537 - 5856890

41354