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Intron Name: Anas_platyrhynchos_platyrhynchos_21_5947106_5947973_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5947106 - 5947973

Intron Length:

868

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGC|GTAAGTCTT

5'SS Class:

major

3'SS Sequence:

GTTGTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

AATTCATACACC

Flanking Amino Acid:

ARLSKEESVLATIQALETAS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.3

72.7

44.5

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

80.1

0.68

76.9

42.1

Minor 5ss

41.1

-1

3.1

54.8

42.5

Minor BPS

46.6

-0.2

2.3

63.22

41.9

Associated Gene:

Gene:

RPN2

Ensembl Gene ID:

ENSAPLG00000004900

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005130

5946885 - 5961629

14745