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Intron Name: Anas_platyrhynchos_platyrhynchos_21_5955274_5955753_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5955274 - 5955753

Intron Length:

480

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGACA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

AATTTCACAATC

Flanking Amino Acid:

NSGAELTPHQTFVRLHNQKT

Intron Amino Acid Position:

348

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

81.4

32.1

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

90.7

0.92

0.6

88.8

20.5

Minor 5ss

32.5

-2

3.1

40.7

45.3

Minor BPS

49.7

-0

1.8

63.15

35.9

Associated Gene:

Gene:

RPN2

Ensembl Gene ID:

ENSAPLG00000004900

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005130

5946885 - 5961629

14745