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Intron Name: Anas_platyrhynchos_platyrhynchos_21_5956553_5957108_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5956553 - 5957108

Intron Length:

556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAACCA

5'SS Class:

major

3'SS Sequence:

TGTGTGTTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTCTTATGAGCT

Flanking Amino Acid:

NLFVPKPEIQHLFREPEKRP

Intron Amino Acid Position:

442

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

58.8

40.3

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

79.5

0.66

72.9

42.2

Minor 5ss

30.5

-2.2

3.3

40.4

45.2

Minor BPS

49.3

0.03

1.9

73.73

42.9

Associated Gene:

Gene:

RPN2

Ensembl Gene ID:

ENSAPLG00000004900

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005130

5946885 - 5961629

14745