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Intron Name: Anas_platyrhynchos_platyrhynchos_21_5998936_5999165_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5998936 - 5999165

Intron Length:

230

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTCAGTGCG

5'SS Class:

major

3'SS Sequence:

GTTCTCGTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTCAC

U12 Branch Point Sequence:

CGGCACTCACCC

Flanking Amino Acid:

TSPQRSGALAGGVTTFVALY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.3

Major BPS

64.9

0.37

29.8

Major PPT

74.9

0.56

0.9

68.9

Minor 5ss

28.9

-2.4

2.9

34.4

Minor BPS

41.5

-0.6

1.9

45.89

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025635

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028267

5998178 - 6003132

4955