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Intron Name: Anas_platyrhynchos_platyrhynchos_21_5999266_6002158_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5999266 - 6002158

Intron Length:

2893

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTGAGTGTC

5'SS Class:

major

3'SS Sequence:

GGTTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCACAC

U12 Branch Point Sequence:

TTTGGCTTCACA

Flanking Amino Acid:

KENASKLSTTRKVTGGWLIP

Intron Amino Acid Position:

191

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.2

75.7

34.4

Major BPS

67.8

0.44

30.1

Major PPT

80.1

0.68

0.9

73.4

Minor 5ss

33.2

-1.9

3.3

42.7

Minor BPS

54.4

0.13

2.3

74.7

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025635

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048504

5998178 - 6003132

4955