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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6002258_6002679_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6002258 - 6002679

Intron Length:

422

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAATTGCC

5'SS Class:

major

3'SS Sequence:

TTCCCTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCTGAG

U12 Branch Point Sequence:

CCGCGCTGAGCC

Flanking Amino Acid:

VAPSDSIQAEEWYFGKITRR

Intron Amino Acid Position:

153

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.9

0.35

1.1

60.2

40.3

Major BPS

-0.2

1.6

40.4

42.3

Major PPT

82.5

0.73

0.7

77.1

24.9

Minor 5ss

35.3

-1.7

3.2

41.6

38.8

Minor BPS

40.8

-0.7

44.23

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025635

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028267

5998178 - 6003132

4955