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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6042483_6043018_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6042483 - 6043018

Intron Length:

536

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTGGGGCTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACTGAC

U12 Branch Point Sequence:

TGCCACTCCACT

Flanking Amino Acid:

IITKGKENKPSYIHYQPAQD

Intron Amino Acid Position:

417

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

35.1

Major BPS

61.3

0.28

52.7

34.2

Major PPT

59.1

0.2

1.1

53.8

45.9

Minor 5ss

32.3

-2

2.7

37.1

33.8

Minor BPS

44.9

-0.3

2.1

63.74

45.7

Associated Gene:

Gene:

PIGT

Ensembl Gene ID:

ENSAPLG00000003899

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004012

6030266 - 6047083

16818