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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6043220_6043323_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6043220 - 6043323

Intron Length:

104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTGAGTGAC

5'SS Class:

major

3'SS Sequence:

TTCCCTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAT

U12 Branch Point Sequence:

CAGCCCCTGATT

Flanking Amino Acid:

QLKWKRPQDSQELSTPVLHA

Intron Amino Acid Position:

350

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.5

0.37

1.3

63.1

37.6

Major BPS

66.4

0.41

1.1

56.9

40.5

Major PPT

88.2

0.86

0.7

83.7

24.4

Minor 5ss

29.4

-2.4

3.1

39.9

Minor BPS

48.8

-0

1.7

62.08

42.1

Associated Gene:

Gene:

PIGT

Ensembl Gene ID:

ENSAPLG00000003899

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004012

6030266 - 6047083

16818