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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6044678_6045300_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6044678 - 6045300

Intron Length:

623

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGCCCG

5'SS Class:

major

3'SS Sequence:

CCTGCCCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAC

U12 Branch Point Sequence:

CTGCTGTTAACC

Flanking Amino Acid:

ASFKPLGLANGTDHRLLRYA

Intron Amino Acid Position:

170

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

53.6

45.1

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

0.47

0.8

61.2

Minor 5ss

33.2

-1.9

40.9

44.9

Minor BPS

50.6

-0

2.1

62.8

Associated Gene:

Gene:

PIGT

Ensembl Gene ID:

ENSAPLG00000003899

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004012

6030266 - 6047083

16818