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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6065675_6067983_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6065675 - 6067983

Intron Length:

2309

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTACG

5'SS Class:

strong_major

3'SS Sequence:

CTCCGGGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTGAC

U12 Branch Point Sequence:

AGGGACTGACGG

Flanking Amino Acid:

IEPQGLHRVCGYWDEFHICA

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

71.4

40.3

Major BPS

55.9

0.15

1.2

Major PPT

65.1

0.34

56.8

38.7

Minor 5ss

30.2

-2.3

2.5

26.6

35.9

Minor BPS

34.9

-1.2

1.9

32.03

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002210

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002207

6064637 - 6068224

3588