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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6093121_6094017_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6093121 - 6094017

Intron Length:

897

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCAGG

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAGCAT

U12 Branch Point Sequence:

GAAACCTTAGCA

Flanking Amino Acid:

LDTDETSGSGDYPDSEDAIY

Intron Amino Acid Position:

413

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

72.7

44.5

Major BPS

63.3

0.33

1.5

41.2

Major PPT

79.7

0.67

0.7

73.5

24.7

Minor 5ss

38.8

-1.3

2.8

48.8

Minor BPS

57.9

0.24

1.6

63.86

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027519

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039889

6088260 - 6096156

7897

ENSAPLT00000019753

6077862 - 6095974

18113