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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6094071_6094317_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6094071 - 6094317

Intron Length:

247

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTATT

5'SS Class:

strong_major

3'SS Sequence:

CTATTCTCTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

TGCTGCTTACTG

Flanking Amino Acid:

IYLTTMDTPLISDNYIPGDR

Intron Amino Acid Position:

431

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

83.5

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

78.5

0.64

0.8

30.9

Minor 5ss

40.4

-1.1

3.2

56.3

42.5

Minor BPS

48.2

-0.2

2.1

55.32

46.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027519

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039889

6088260 - 6096156

7897

ENSAPLT00000019753

6077862 - 6095974

18113