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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6094502_6095714_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6094502 - 6095714

Intron Length:

1213

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTAGTC

5'SS Class:

major

3'SS Sequence:

TTTTTTTCCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

TTAGACTTAATT

Flanking Amino Acid:

SIFERTEVLTALIAGGAVGL

Intron Amino Acid Position:

492

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.52

1.1

66.2

38.2

Major BPS

78.2

0.7

77.9

32.1

Major PPT

90.7

0.92

0.6

84.9

29.9

Minor 5ss

33.7

-1.9

3.7

46.6

Minor BPS

67.6

0.63

1.6

81.85

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027519

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039889

6088260 - 6096156

7897

ENSAPLT00000019753

6077862 - 6095974

18113