Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_6110873_6110976_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6110873 - 6110976

Intron Length:

104

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCCTTGCTG

5'SS Class:

major

3'SS Sequence:

GACTCCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTCAT

U12 Branch Point Sequence:

GCCCCTCTGACT

Flanking Amino Acid:

QEMVVDLRSKVQKTLKENLA

Intron Amino Acid Position:

372

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.4

0.29

1.3

52.1

44.8

Major BPS

74.8

0.62

0.9

75.3

29.7

Major PPT

70.5

0.46

0.9

62.5

34.2

Minor 5ss

25.6

-2.8

38.7

46.4

Minor BPS

48.4

-0

1.7

61.93

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003749

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003839

6110786 - 6117708

6923