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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6115851_6117092_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6115851 - 6117092

Intron Length:

1242

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

GTCCTGTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAG

U12 Branch Point Sequence:

TTGTCCTTAGTG

Flanking Amino Acid:

PEGDQAEFELEELTSTSVEH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

69.6

41.1

Major BPS

60.1

0.25

1.6

60.7

45.9

Major PPT

70.4

0.46

64.4

41.4

Minor 5ss

35.5

-1.7

3.4

47.8

42.4

Minor BPS

68.3

0.44

1.6

71.2

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003749

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003839

6110786 - 6117708

6923