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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6117162_6117672_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6117162 - 6117672

Intron Length:

511

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATC|GTGCGTGCG

5'SS Class:

weak_major

3'SS Sequence:

GTTTGTGTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCAAAT

U12 Branch Point Sequence:

AATAGCTGAGCC

Flanking Amino Acid:

TPKFADLPGIAWNEPEVYET

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.4

0.13

1.3

49.6

41.3

Major BPS

53.3

0.08

1.1

Major PPT

64.6

0.33

1.1

58.1

47.3

Minor 5ss

-2.5

3.2

32.4

36.4

Minor BPS

44.6

-0.4

56.21

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003749

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003839

6110786 - 6117708

6923