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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6138849_6142568_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6138849 - 6142568

Intron Length:

3720

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGATGA

5'SS Class:

major

3'SS Sequence:

TTTTCCTCCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

AACTCATTAGCT

Flanking Amino Acid:

VTGVLDQTTLEWMKKPRCGV

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

62.4

39.1

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

80.6

0.69

0.7

74.2

Minor 5ss

38.6

-1.3

43.9

44.5

Minor BPS

56.3

0.28

1.9

73.19

43.1

Associated Gene:

Gene:

MMP24

Ensembl Gene ID:

ENSAPLG00000007771

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008068

6136205 - 6178026

41822