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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6171459_6173211_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6171459 - 6173211

Intron Length:

1753

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTAAAA

5'SS Class:

major

3'SS Sequence:

CTGATTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

GCTTTCTGATTT

Flanking Amino Acid:

LFRGEMFVFKDRWFWRLRNN

Intron Amino Acid Position:

501

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

69.9

35.9

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

82.8

0.74

0.9

80.4

Minor 5ss

31.8

-2.1

3.1

40.4

45.3

Minor BPS

51.8

0.14

1.7

68.88

42.5

Associated Gene:

Gene:

MMP24

Ensembl Gene ID:

ENSAPLG00000007771

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008068

6136205 - 6178026

41822