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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6173351_6175206_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6173351 - 6175206

Intron Length:

1856

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGTAT

5'SS Class:

major

3'SS Sequence:

TGTTCATCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAT

U12 Branch Point Sequence:

TTGCTTGTATCC

Flanking Amino Acid:

RSDGKFVFFKGDKYWVFKEV

Intron Amino Acid Position:

547

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

69.1

Major BPS

87.1

0.92

0.7

85.9

22.5

Major PPT

79.8

0.67

0.9

70.6

40.1

Minor 5ss

36.7

-1.5

3.6

55.1

49.1

Minor BPS

44.7

-0.4

2.1

58.52

41.1

Associated Gene:

Gene:

MMP24

Ensembl Gene ID:

ENSAPLG00000007771

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008068

6136205 - 6178026

41822