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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6183887_6185006_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6183887 - 6185006

Intron Length:

1120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

ATTTTCTAAATC

Flanking Amino Acid:

ATNMRDSLIDSLT*

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

86.5

0.82

0.7

85.4

29.4

Minor 5ss

31.7

-2.1

3.1

39.7

45.9

Minor BPS

67.2

0.52

1.6

75.93

34.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025867

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026295

6183877 - 6189004

5128

ENSAPLT00000022765

6183877 - 6188804

4928