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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6185189_6185808_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6185189 - 6185808

Intron Length:

620

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGGCAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTCCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

TACTGCTGATTT

Flanking Amino Acid:

LSSLLQVPLVAGTVNRGSEV

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

71.3

40.1

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

83.4

0.75

0.7

77.7

31.1

Minor 5ss

32.6

-2

3.4

44.3

44.6

Minor BPS

46.7

-0.1

2.1

65.69

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025867

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026295

6183877 - 6189004

5128

ENSAPLT00000022765

6183877 - 6188804

4928