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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6185986_6187235_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6185986 - 6187235

Intron Length:

1250

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATACGGC

5'SS Class:

weak_major

3'SS Sequence:

TCTCTGTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATACCAT

U12 Branch Point Sequence:

TTTTGCTGAGGA

Flanking Amino Acid:

VALVHPDLDRETEEILADVL

Intron Amino Acid Position:

124

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.3

0.24

1.1

47.4

41.8

Major BPS

56.8

0.17

1.3

66.9

39.3

Major PPT

85.2

0.79

0.8

79.9

32.1

Minor 5ss

41.7

-0.9

3.3

49.7

46.9

Minor BPS

46.9

-0.2

2.3

68.12

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025867

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026295

6183877 - 6189004

5128

ENSAPLT00000022765

6183877 - 6188804

4928