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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6188609_6188697_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6188609 - 6188697

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGAG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTAAC

U12 Branch Point Sequence:

TGACCCCTAACG

Flanking Amino Acid:

VAIGGSENFYSVFEGELFGT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.1

37.5

Major BPS

59.7

0.24

1.1

61.2

32.6

Major PPT

86.3

0.82

0.7

80.7

24.4

Minor 5ss

23.1

-3.1

3.2

27.7

44.2

Minor BPS

58.2

0.12

1.8

64.09

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025867

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022765

6183877 - 6188804

4928