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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6191281_6198411_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6191281 - 6198411

Intron Length:

7131

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTTTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACGTAAT

U12 Branch Point Sequence:

TTACACGTAATT

Flanking Amino Acid:

DCDQVLAGTYSFTWLCSQVH

Intron Amino Acid Position:

283

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

82.1

24.6

Major BPS

0.32

1.2

63.6

40.3

Major PPT

0.83

0.6

83.9

24.2

Minor 5ss

27.3

-2.6

2.7

30.6

42.8

Minor BPS

50.8

0.1

2.2

75.51

Associated Gene:

Gene:

FAM83C

Ensembl Gene ID:

ENSAPLG00000007684

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007965

6190362 - 6211926

21565

ENSAPLT00000038976

6190362 - 6215638

25277