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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6198537_6202485_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6198537 - 6202485

Intron Length:

3949

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

TCTTTGGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTACCAT

U12 Branch Point Sequence:

ATCCCCTTACCA

Flanking Amino Acid:

KMSLTQDSFPNMRIRCLSGD

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

32.3

Major BPS

65.6

0.39

1.3

75.1

39.4

Major PPT

82.9

0.74

0.9

80.2

37.3

Minor 5ss

48.3

-0.1

2.8

72.9

37.4

Minor BPS

63.7

0.43

1.7

71.2

40.9

Associated Gene:

Gene:

FAM83C

Ensembl Gene ID:

ENSAPLG00000007684

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007965

6190362 - 6211926

21565