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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6198586_6202510_R

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

6198586 - 6202510

Intron Length:

3925

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTCTCTTAC

5'SS Class:

weak_minor

3'SS Sequence:

GGAAATATTTCAG|T

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

TAATCATTGATG

Flanking Amino Acid:

LKHFVEMCNKIFVQHTSPYH

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

49.2

-0

1.4

54.9

39.2

Major BPS

80.4

0.76

80.3

31.8

Major PPT

61.8

0.27

1.1

55.5

48.1

Minor 5ss

2.2

65.5

39.2

Minor BPS

0.07

1.7

61.47

40.3

Associated Gene:

Gene:

FAM83C

Ensembl Gene ID:

ENSAPLG00000007684

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038976

6190362 - 6215638

25277