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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6202654_6211371_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6202654 - 6211371

Intron Length:

8718

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTATGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCTGGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCCAC

U12 Branch Point Sequence:

TTCCCCCCACCC

Flanking Amino Acid:

FRSLISRARTVIAIVMDLFT

Intron Amino Acid Position:

186

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

80.1

34.5

Major BPS

-0.3

1.2

49.7

35.3

Major PPT

0.36

61.8

39.9

Minor 5ss

45.9

-0.4

2.5

60.3

44.3

Minor BPS

45.2

-0.3

2.1

61.18

43.8

Associated Gene:

Gene:

FAM83C

Ensembl Gene ID:

ENSAPLG00000007684

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038976

6190362 - 6215638

25277

ENSAPLT00000007965

6190362 - 6211926

21565