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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6223590_6224967_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6223590 - 6224967

Intron Length:

1378

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAGG

5'SS Class:

strong_major

3'SS Sequence:

CTCTATACTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TAATTTTTAACC

Flanking Amino Acid:

FYAALFGYDEGILSDDHVLA

Intron Amino Acid Position:

308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.5

40.6

Major BPS

87.3

0.93

0.8

36.5

Major PPT

73.2

0.52

0.8

70.6

34.5

Minor 5ss

32.9

-2

2.9

40.4

45.3

Minor BPS

74.9

0.76

1.1

75.95

33.8

Associated Gene:

Gene:

UQCC1

Ensembl Gene ID:

ENSAPLG00000007532

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007831

6220407 - 6267496

47090

ENSAPLT00000042776

6220407 - 6265973

45567