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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6225046_6244513_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6225046 - 6244513

Intron Length:

19468

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTATTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAGAT

U12 Branch Point Sequence:

TCTGCTTTATTT

Flanking Amino Acid:

DVQQRGKVMGINSVVLKEDL

Intron Amino Acid Position:

282

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.9

30.2

Major BPS

79.2

0.72

Major PPT

90.1

0.9

0.7

88.2

28.6

Minor 5ss

41.4

-1

2.9

49.9

46.4

Minor BPS

59.4

0.37

1.7

74.81

43.2

Associated Gene:

Gene:

UQCC1

Ensembl Gene ID:

ENSAPLG00000007532

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042776

6220407 - 6265973

45567

ENSAPLT00000007831

6220407 - 6267496

47090