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Intron Name: Anas_platyrhynchos_platyrhynchos_21_623150_623248_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

623150 - 623248

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTGAGTGTG

5'SS Class:

major

3'SS Sequence:

TTTTCTTTGCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

TTATAAACAAAT

Flanking Amino Acid:

MPRTGNGPMSVEVKMPRAVT

Intron Amino Acid Position:

668

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.1

65.2

40.8

Major BPS

78.6

0.71

78.6

Major PPT

85.2

0.79

0.9

80.8

36.8

Minor 5ss

32.8

-2

3.3

40.9

45.3

Minor BPS

42.3

-0.5

2.2

66.68

42.5

Associated Gene:

Gene:

STAU1

Ensembl Gene ID:

ENSAPLG00000010527

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011063

622523 - 647387

24865