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Intron Name: Anas_platyrhynchos_platyrhynchos_21_623335_624868_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

623335 - 624868

Intron Length:

1534

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGATGA

5'SS Class:

major

3'SS Sequence:

TTCTTTCGTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTGAA

U12 Branch Point Sequence:

TCAAGTTGAATG

Flanking Amino Acid:

GKDVESCHDMAALNILKLLS

Intron Amino Acid Position:

640

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

63.1

37.8

Major BPS

63.2

0.33

1.1

55.1

42.1

Major PPT

80.9

0.7

0.8

81.2

30.9

Minor 5ss

43.5

-0.7

2.8

53.2

45.8

Minor BPS

43.9

-0.6

1.9

45.3

41.5

Associated Gene:

Gene:

STAU1

Ensembl Gene ID:

ENSAPLG00000010527

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034828

622523 - 642175

19653

ENSAPLT00000011063

622523 - 647387

24865