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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6244623_6251032_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6244623 - 6251032

Intron Length:

6410

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TATGTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

AAGCTATGAATA

Flanking Amino Acid:

SWFLVAQLHVWMCLVRMKQE

Intron Amino Acid Position:

245

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

74.2

36.5

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

83.4

0.75

0.8

77.5

36.5

Minor 5ss

32.2

-2

3.1

37.6

42.2

Minor BPS

45.3

-0.3

1.6

50.49

33.8

Associated Gene:

Gene:

UQCC1

Ensembl Gene ID:

ENSAPLG00000007532

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042776

6220407 - 6265973

45567

ENSAPLT00000007831

6220407 - 6267496

47090