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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6257097_6259908_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6257097 - 6259908

Intron Length:

2812

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAAGCAT

5'SS Class:

major

3'SS Sequence:

TCTTTTTCTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

GTGTAATCAAGT

Flanking Amino Acid:

FTGPLKYSRWKIKVAALRMY

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

62.9

43.2

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

0.88

0.6

20.3

Minor 5ss

31.3

-2.1

3.5

38.6

46.6

Minor BPS

43.9

-0.3

2.2

63.52

45.9

Associated Gene:

Gene:

UQCC1

Ensembl Gene ID:

ENSAPLG00000007532

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042776

6220407 - 6265973

45567

ENSAPLT00000007831

6220407 - 6267496

47090