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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6260014_6262433_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6260014 - 6262433

Intron Length:

2420

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGAAGA

5'SS Class:

major

3'SS Sequence:

TTCTGTTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTGAT

U12 Branch Point Sequence:

TTCTGTTTTACA

Flanking Amino Acid:

LNRTFYNTNKHLSAKDSLQT

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

1.1

72.9

38.1

Major BPS

74.7

0.61

0.9

63.4

35.6

Major PPT

88.4

0.86

0.7

83.2

Minor 5ss

29.2

-2.4

2.6

32.8

41.5

Minor BPS

54.2

0.13

2.1

70.65

41.9

Associated Gene:

Gene:

UQCC1

Ensembl Gene ID:

ENSAPLG00000007532

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042776

6220407 - 6265973

45567

ENSAPLT00000007831

6220407 - 6267496

47090