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Intron Name: Anas_platyrhynchos_platyrhynchos_21_626064_627946_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

626064 - 627946

Intron Length:

1883

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

CTCCTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

TCTGTATTGATG

Flanking Amino Acid:

FEPGSEETSTSNKEDEFRMP

Intron Amino Acid Position:

492

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

76.9

31.6

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

84.7

0.78

0.7

79.9

25.5

Minor 5ss

37.9

-1.4

2.7

47.4

36.1

Minor BPS

-0.3

1.8

54.31

41.6

Associated Gene:

Gene:

STAU1

Ensembl Gene ID:

ENSAPLG00000010527

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034828

622523 - 642175

19653

ENSAPLT00000011063

622523 - 647387

24865