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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6262539_6264077_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6262539 - 6264077

Intron Length:

1539

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGATGT

5'SS Class:

strong_major

3'SS Sequence:

TCATTTTTACTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCGTCAT

U12 Branch Point Sequence:

TCATTTTTACTA

Flanking Amino Acid:

CRRMLHSIFQRHKTGQFQLS

Intron Amino Acid Position:

132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

72.5

39.9

Major BPS

72.2

0.55

1.2

73.6

41.8

Major PPT

75.2

0.57

0.9

70.5

39.7

Minor 5ss

38.3

-1.3

3.4

56.2

Minor BPS

55.4

0.17

1.6

62.67

38.7

Associated Gene:

Gene:

UQCC1

Ensembl Gene ID:

ENSAPLG00000007532

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007831

6220407 - 6267496

47090

ENSAPLT00000042776

6220407 - 6265973

45567