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Intron Name: Anas_platyrhynchos_platyrhynchos_21_628929_629576_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

628929 - 629576

Intron Length:

648

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTATG

5'SS Class:

major

3'SS Sequence:

CTCTTTTGTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

AAGATTTTATTT

Flanking Amino Acid:

LPRRREFVMQVKVGVHTAEG

Intron Amino Acid Position:

419

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

75.6

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

82.3

0.73

0.9

75.9

Minor 5ss

41.8

-0.9

2.5

51.4

45.2

Minor BPS

48.1

-0

1.5

59.34

38.6

Associated Gene:

Gene:

STAU1

Ensembl Gene ID:

ENSAPLG00000010527

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034828

622523 - 642175

19653

ENSAPLT00000011063

622523 - 647387

24865