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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6301497_6302498_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6301497 - 6302498

Intron Length:

1002

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TGTGGGCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

GATGGTTTGATG

Flanking Amino Acid:

LQKLIKDITEVVLDDSDSTV

Intron Amino Acid Position:

323

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.8

1.01

0.7

85.8

24.1

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

71.4

0.48

65.9

45.3

Minor 5ss

30.6

-2.2

2.5

34.4

41.2

Minor BPS

45.2

-0.5

1.9

47.09

40.8

Associated Gene:

Gene:

CEP250

Ensembl Gene ID:

ENSAPLG00000007185

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027821

6294347 - 6326653

32307

ENSAPLT00000021370

6294347 - 6326653

32307

ENSAPLT00000007494

6294347 - 6326953

32607

ENSAPLT00000031647

6295764 - 6326653

30890