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Intron Name: Anas_platyrhynchos_platyrhynchos_21_6310961_6312037_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6310961 - 6312037

Intron Length:

1077

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGAGT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTGTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTAAA

U12 Branch Point Sequence:

TCTTTCTGTACA

Flanking Amino Acid:

RTRVENAKQEVLLEKESEKK

Intron Amino Acid Position:

896

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

75.8

39.8

Major BPS

64.8

0.37

1.2

67.9

36.3

Major PPT

84.1

0.77

0.8

79.7

32.4

Minor 5ss

33.3

-1.9

3.3

48.8

Minor BPS

58.1

0.25

1.8

71.49

40.4

Associated Gene:

Gene:

CEP250

Ensembl Gene ID:

ENSAPLG00000007185

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027821

6294347 - 6326653

32307

ENSAPLT00000021370

6294347 - 6326653

32307

ENSAPLT00000007494

6294347 - 6326953

32607

ENSAPLT00000031647

6295764 - 6326653

30890